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This is not a recommended, nor is it a supported, configuration of Domino 8.0.1 on Windows 2003 according to all that I have read. Both Sametime and BES install Windows services and use a Domino server add-in task to connect the Domino side to the native product services. Trying to set them up correctly and keep them running nicely is not an easy thing to do. Neither product can be set up on Domino Partitioned servers either so you are stuck having to put them on different boxes.